Difference between revisions of "Template:Event2"

Revision as of 15:50, 17 June 2020 (view source)

WikiSysop (talk | contribs)

(Undo revision 880845 by Pusher (talk))

Latest revision as of 16:24, 6 July 2020 (view source)

WikiSysop (talk | contribs)

(17 intermediate revisions by the same user not shown)

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−

<includeonly>__NOTOC__{{#vardefine:id|{{#cleanTag:{{{1}}}|at|pre}}}}{{#vardefine:genome|{{#cleanTag:{{{1}}}|pre}}}}{{BioDB_oldid|{{#var:id|}}|{{#var:genome|}}}}{{#vardefine:sub|{{#~~sub~~:{{#var:id}}|0|9}}}}<nowiki />{{DISPLAYTITLE:{{#var:id|}}}}{{#CustomMsg:Help:Event.ini|ini}}<nowiki /><span id="molid" data-molid="{{{1}}}"></span><nowiki />

+

<includeonly>__NOTOC__{{#vardefine:id|{{#cleanTag:{{{1}}}|at|pre}}}}{{#vardefine:genome|{{#cleanTag:{{{1}}}|pre}}}}{{BioDB_oldid|{{#var:id|}}|{{#var:genome|}}}}{{#vardefine:sub|{{#rmatch:{{#var:id}}|(\D+\d{4})|$1}}}}<nowiki />{{DISPLAYTITLE:{{#var:id|}}}}{{#CustomMsg:Help:Event.ini|ini}}<nowiki /><span id="molid" data-molid="{{{1}}}"></span><nowiki />

''{{TypeEvent|{{PAGENAME}}}}''<nowiki />{{BioDB_event|{{#var:id|}}|{{#var:genome|}}}}<nowiki />

{{BioDB_event_metrics|{{#var:id}}}}<nowiki />

Line 53:

<div class="">{{#var:protimpact|No protein impact description available}}{{HelpLinkedPage2|type=helpicon|msg=event-impact|output=data-tooltip}}

−

~~{{PDBshow|{{#var:id|}}}}~~

</div>{{BioDB_protdisorder|{{#var:id|}}|{{#var:genome|}}}}

−

+

<div class="head"><span>Features</span>

−

<div class="rowin"><div class="labelin">Disorder rate (disopred):</div><div class="contentin">C1={{#var:c1dis|NA}} A={{#var:adis|NA}} C2={{#var:c2dis|NA}}</div>

+

<div class="rowin"><div class="labelin">Disorder rate (disopred):</div><div class="contentin">  <span class="colorc1">C1</span>={{#var:c1dis|NA}} <span class="colora">A</span>={{#var:adis|NA}} <span class="colorc2">C2</span>={{#var:c2dis|NA}}</div>

−

</div>

+

</div>{{HelpLinkedPage2|type=helpicon|msg=event-disorder|output=data-tooltip}}

−

<div class="rowin"><div class="labelin">Domain overlap (PFAM):</div><div class="contentin">

+

<div class="rowin"><div class="labelin">Domain overlap (PFAM):</div><div class="contentin">{{HelpLinkedPage2|type=helpicon|msg=event-pfam|output=data-tooltip}}

<div class="block">{{BioDB_pfam|{{#var:id|}}|{{#var:genome|}}}}

−

+

−

<div class="rowin"><div class="labelin">A:</div><div class="contentin">{{#var:apfam|NA}}</div></div>

+

<div class="rowin"><div class="labelin colora">A:</div><div class="contentin">{{#var:apfam|NA}}</div></div>

−

+

</div>

</div></div>

−

+

<div class="rowin">{{#vardefine:isoid|{{#replace:{{#var:id}}|/|_}}}}

{{BioDB protein isoforms|{{#var:id}}|{{#var:genome}}|Incl_main}}

−

<div class="labelin">Main Inclusion Isoform:</div><div class="contentin">{{#var:isoformid}}</div>

+

<div class="labelin">Main Inclusion Isoform:</div><div class="contentin isoforms">{{#var:isoformid}}</div>

</div>

−

<div class="contentin">{{ExternalImgURL|{{SERVER}}/domain_plots/{{#var:genome}}/{{#var:sub}}/{{#var:id}}-INC.png|~~Test~~}}</div>

+

<div class="contentin domainimg">{{#ifeq:{{#vastDBFileExists:domain_plots/{{#var:genome}}/{{#var:sub}}/{{#var:isoid}}-INC.png}}|1|{{ExternalImgURL|{{SERVER}}/domain_plots/{{#var:genome}}/{{#var:sub}}/{{#var:isoid}}-INC.png|{{#var:isoid}}-INC}}}}</div>

</div>

{{BioDB protein isoforms|{{#var:id}}|{{#var:genome}}|Excl_main}}

−

<div class="~~contentin~~">Main Skipping Isoform:</div><div class="contentin">{{#var:isoformid}}</div>

+

<div class="labelin">Main Skipping Isoform:</div><div class="contentin isoforms">{{#var:isoformid}}</div>

</div>

−

<div class="contentin">{{ExternalImgURL|{{SERVER}}/domain_plots/{{#var:genome}}/{{#var:sub}}/{{#var:id}}-EXC.png|~~Test~~}}</div>

+

<div class="contentin domainimg">{{#ifeq:{{#vastDBFileExists:domain_plots/{{#var:genome}}/{{#var:sub}}/{{#var:isoid}}-EXC.png}}|1|{{ExternalImgURL|{{SERVER}}/domain_plots/{{#var:genome}}/{{#var:sub}}/{{#var:isoid}}-EXC.png|{{#var:isoid}}-EXC}}}}</div>

</div>

{{BioDB protein isoforms|{{#var:id}}|{{#var:genome}}|Incl_other}}

−

<div class="labelin">Other Inclusion Isoforms:</div><div class="contentin">{{#var:isoformid}}</div>

+

<div class="labelin">Other Inclusion Isoforms:</div><div class="contentin isoforms">{{#var:isoformid}}</div>

</div>

{{BioDB protein isoforms|{{#var:id}}|{{#var:genome}}|Excl_other}}

−

<div class="labelin">Other Skipping Isoforms:</div><div class="contentin">{{#var:isoformid}}</div>

+

<div class="labelin">Other Skipping Isoforms:</div><div class="contentin isoforms">{{#var:isoformid}}</div>

</div></div></div></div></div>

<div class="row"><div class="label small-6 large-4 columns">Associated events</div><div class="content small-6 large-8 columns">{{Associated2|{{#var:id|}}|{{#var:genome|}}}}{{HelpLinkedPage2|type=helpicon|msg=event-associated|output=data-tooltip}}</div>

−

</div>{{Event Other Assemblies|{{#var:id|}}|{{#var:genome|}}}}

+

</div>{{Event Other Assemblies|{{#var:id|}}|{{#var:genome|}}}}{{BioDB primer|{{#var:id|}}|{{#var:genome|}}}}

−

<div class="row"><div class="label small-6 large-4">Conservation</div><div class="content small-6 large-8 columns">{{HelpLinkedPage2|type=helpicon|msg=event-conservation|output=data-tooltip}}{{ConservationFull2|{{#var:id|}}|{{#var:genome|}}}}</div>

−

~~</div>~~{{BioDB primer|{{#var:id|}}|{{#var:genome|}}}}

<div class="row"><div class="label small-6 large-4 columns">Primers PCR</div>

Template

Difference between revisions of "Event2"

From PastDB

Latest revision as of 16:24, 6 July 2020

@@ Line 1: / Line 1: @@
-<includeonly>__NOTOC__{{#vardefine:id|{{#cleanTag:{{{1}}}|at|pre}}}}{{#vardefine:genome|{{#cleanTag:{{{1}}}|pre}}}}{{BioDB_oldid|{{#var:id|}}|{{#var:genome|}}}}{{#vardefine:sub|{{#sub:{{#var:id}}|0|9}}}}<nowiki />{{DISPLAYTITLE:{{#var:id|}}}}{{#CustomMsg:Help:Event.ini|ini}}<nowiki /><span id="molid" data-molid="{{{1}}}"></span><nowiki />
+<includeonly>__NOTOC__{{#vardefine:id|{{#cleanTag:{{{1}}}|at|pre}}}}{{#vardefine:genome|{{#cleanTag:{{{1}}}|pre}}}}{{BioDB_oldid|{{#var:id|}}|{{#var:genome|}}}}{{#vardefine:sub|{{#rmatch:{{#var:id}}|(\D+\d{4})|$1}}}}<nowiki />{{DISPLAYTITLE:{{#var:id|}}}}{{#CustomMsg:Help:Event.ini|ini}}<nowiki /><span id="molid" data-molid="{{{1}}}"></span><nowiki />
 ''{{TypeEvent|{{PAGENAME}}}}''<nowiki />{{BioDB_event|{{#var:id|}}|{{#var:genome|}}}}<nowiki />
 {{BioDB_event_metrics|{{#var:id}}}}<nowiki />
@@ Line 53: / Line 53: @@
 	<div class="content small-6 large-8 columns">
 		<div class="">{{#var:protimpact|No protein impact description available}}{{HelpLinkedPage2|type=helpicon|msg=event-impact|output=data-tooltip}}
-{{PDBshow|{{#var:id|}}}}
                  </div>{{BioDB_protdisorder|{{#var:id|}}|{{#var:genome|}}}}
-		<div class="block">
+		<div class="block protimpact">
 			<div class="head"><span>Features</span>
 <span class="unfold up"></span></div>
 			<div class="body">
-				<div class="rowin"><div class="labelin">Disorder rate (disopred):</div><div class="contentin">C1={{#var:c1dis|NA}} A={{#var:adis|NA}} C2={{#var:c2dis|NA}}</div>
+				<div class="rowin"><div class="labelin">Disorder rate (disopred):</div><div class="contentin">&nbsp;&nbsp;<span class="colorc1">C1</span>={{#var:c1dis|NA}} <span class="colora">A</span>={{#var:adis|NA}} <span class="colorc2">C2</span>={{#var:c2dis|NA}}</div>
-                         </div>
+                         </div>{{HelpLinkedPage2|type=helpicon|msg=event-disorder|output=data-tooltip}}
-				<div class="rowin"><div class="labelin">Domain overlap (PFAM):</div><div class="contentin">
+				<div class="rowin"><div class="labelin">Domain overlap (PFAM):</div><div class="contentin">{{HelpLinkedPage2|type=helpicon|msg=event-pfam|output=data-tooltip}}
 					<div class="block">{{BioDB_pfam|{{#var:id|}}|{{#var:genome|}}}}
 						<div class="body">
-							<div class="rowin"><div class="labelin">C1:</div><div class="contentin">{{#var:c1pfam|NA}}</div></div>
+							<div class="rowin"><div class="labelin colorc1">C1:</div><div class="contentin">{{#var:c1pfam|NA}}</div></div>
-							<div class="rowin"><div class="labelin">A:</div><div class="contentin">{{#var:apfam|NA}}</div></div>
+							<div class="rowin"><div class="labelin colora">A:</div><div class="contentin">{{#var:apfam|NA}}</div></div>
-							<div class="rowin"><div class="labelin">C2:</div><div class="contentin">{{#var:c2pfam|NA}}</div></div>
+							<div class="rowin"><div class="labelin colorc2">C2:</div><div class="contentin">{{#var:c2pfam|NA}}</div></div>
 						</div>
 					</div>
 				</div></div>
-<div class="rowin">
+<div class="rowin">{{#vardefine:isoid|{{#replace:{{#var:id}}|/|_}}}}
        {{BioDB protein isoforms|{{#var:id}}|{{#var:genome}}|Incl_main}}
-     <div class="labelin">Main Inclusion Isoform:</div><div class="contentin">{{#var:isoformid}}</div>
+     <div class="labelin">Main Inclusion Isoform:</div><div class="contentin isoforms">{{#var:isoformid}}</div>
 </div>
 <div class="rowin">
-      <div class="contentin">{{ExternalImgURL|{{SERVER}}/domain_plots/{{#var:genome}}/{{#var:sub}}/{{#var:id}}-INC.png|Test}}</div>
+      <div class="contentin domainimg">{{#ifeq:{{#vastDBFileExists:domain_plots/{{#var:genome}}/{{#var:sub}}/{{#var:isoid}}-INC.png}}|1|{{ExternalImgURL|{{SERVER}}/domain_plots/{{#var:genome}}/{{#var:sub}}/{{#var:isoid}}-INC.png|{{#var:isoid}}-INC}}}}</div>
 </div>
 <div class="rowin">
     {{BioDB protein isoforms|{{#var:id}}|{{#var:genome}}|Excl_main}}
-     <div class="contentin">Main Skipping Isoform:</div><div class="contentin">{{#var:isoformid}}</div>
+     <div class="labelin">Main Skipping Isoform:</div><div class="contentin isoforms">{{#var:isoformid}}</div>
 </div>
 <div class="rowin">
-      <div class="contentin">{{ExternalImgURL|{{SERVER}}/domain_plots/{{#var:genome}}/{{#var:sub}}/{{#var:id}}-EXC.png|Test}}</div>
+      <div class="contentin domainimg">{{#ifeq:{{#vastDBFileExists:domain_plots/{{#var:genome}}/{{#var:sub}}/{{#var:isoid}}-EXC.png}}|1|{{ExternalImgURL|{{SERVER}}/domain_plots/{{#var:genome}}/{{#var:sub}}/{{#var:isoid}}-EXC.png|{{#var:isoid}}-EXC}}}}</div>
 </div>
 <div class="rowin">
          {{BioDB protein isoforms|{{#var:id}}|{{#var:genome}}|Incl_other}}
-     <div class="labelin">Other Inclusion Isoforms:</div><div class="contentin">{{#var:isoformid}}</div>
+     <div class="labelin">Other Inclusion Isoforms:</div><div class="contentin isoforms">{{#var:isoformid}}</div>
 </div>
 <div class="rowin">
      {{BioDB protein isoforms|{{#var:id}}|{{#var:genome}}|Excl_other}}
-     <div class="labelin">Other Skipping Isoforms:</div><div class="contentin">{{#var:isoformid}}</div>
+     <div class="labelin">Other Skipping Isoforms:</div><div class="contentin isoforms">{{#var:isoformid}}</div>
 </div></div></div></div></div>
 <div class="row"><div class="label small-6 large-4 columns">Associated events</div><div class="content small-6 large-8 columns">{{Associated2|{{#var:id|}}|{{#var:genome|}}}}{{HelpLinkedPage2|type=helpicon|msg=event-associated|output=data-tooltip}}</div>
-</div>{{Event Other Assemblies|{{#var:id|}}|{{#var:genome|}}}}
+</div>{{Event Other Assemblies|{{#var:id|}}|{{#var:genome|}}}}{{BioDB primer|{{#var:id|}}|{{#var:genome|}}}}
-<div class="row"><div class="label small-6 large-4">Conservation</div><div class="content small-6 large-8 columns">{{HelpLinkedPage2|type=helpicon|msg=event-conservation|output=data-tooltip}}{{ConservationFull2|{{#var:id|}}|{{#var:genome|}}}}</div>
-</div>{{BioDB primer|{{#var:id|}}|{{#var:genome|}}}}
 <div class="row"><div class="label small-6 large-4 columns">Primers PCR</div>
 	<div class="content small-6 large-8 columns">