Template

Difference between revisions of "Event2"

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(Undo revision 880845 by Pusher (talk))
 
 
(17 intermediate revisions by the same user not shown)
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<includeonly>__NOTOC__{{#vardefine:id|{{#cleanTag:{{{1}}}|at|pre}}}}{{#vardefine:genome|{{#cleanTag:{{{1}}}|pre}}}}{{BioDB_oldid|{{#var:id|}}|{{#var:genome|}}}}{{#vardefine:sub|{{#sub:{{#var:id}}|0|9}}}}<nowiki />{{DISPLAYTITLE:{{#var:id|}}}}{{#CustomMsg:Help:Event.ini|ini}}<nowiki /><span id="molid" data-molid="{{{1}}}"></span><nowiki />
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<includeonly>__NOTOC__{{#vardefine:id|{{#cleanTag:{{{1}}}|at|pre}}}}{{#vardefine:genome|{{#cleanTag:{{{1}}}|pre}}}}{{BioDB_oldid|{{#var:id|}}|{{#var:genome|}}}}{{#vardefine:sub|{{#rmatch:{{#var:id}}|(\D+\d{4})|$1}}}}<nowiki />{{DISPLAYTITLE:{{#var:id|}}}}{{#CustomMsg:Help:Event.ini|ini}}<nowiki /><span id="molid" data-molid="{{{1}}}"></span><nowiki />
 
''{{TypeEvent|{{PAGENAME}}}}''<nowiki />{{BioDB_event|{{#var:id|}}|{{#var:genome|}}}}<nowiki />
 
''{{TypeEvent|{{PAGENAME}}}}''<nowiki />{{BioDB_event|{{#var:id|}}|{{#var:genome|}}}}<nowiki />
 
{{BioDB_event_metrics|{{#var:id}}}}<nowiki />
 
{{BioDB_event_metrics|{{#var:id}}}}<nowiki />
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<div class="content small-6 large-8 columns">
 
<div class="content small-6 large-8 columns">
 
<div class="">{{#var:protimpact|No protein impact description available}}{{HelpLinkedPage2|type=helpicon|msg=event-impact|output=data-tooltip}}
 
<div class="">{{#var:protimpact|No protein impact description available}}{{HelpLinkedPage2|type=helpicon|msg=event-impact|output=data-tooltip}}
{{PDBshow|{{#var:id|}}}}
 
 
                 </div>{{BioDB_protdisorder|{{#var:id|}}|{{#var:genome|}}}}
 
                 </div>{{BioDB_protdisorder|{{#var:id|}}|{{#var:genome|}}}}
<div class="block">
+
<div class="block protimpact">
 
<div class="head"><span>Features</span>
 
<div class="head"><span>Features</span>
 
<span class="unfold up"></span></div>
 
<span class="unfold up"></span></div>
 
<div class="body">
 
<div class="body">
<div class="rowin"><div class="labelin">Disorder rate (disopred):</div><div class="contentin">C1={{#var:c1dis|NA}} A={{#var:adis|NA}} C2={{#var:c2dis|NA}}</div>  
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<div class="rowin"><div class="labelin">Disorder rate (disopred):</div><div class="contentin">&nbsp;&nbsp;<span class="colorc1">C1</span>={{#var:c1dis|NA}} <span class="colora">A</span>={{#var:adis|NA}} <span class="colorc2">C2</span>={{#var:c2dis|NA}}</div>  
                         </div>                
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                         </div>{{HelpLinkedPage2|type=helpicon|msg=event-disorder|output=data-tooltip}}
<div class="rowin"><div class="labelin">Domain overlap (PFAM):</div><div class="contentin">
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<div class="rowin"><div class="labelin">Domain overlap (PFAM):</div><div class="contentin">{{HelpLinkedPage2|type=helpicon|msg=event-pfam|output=data-tooltip}}
 
<div class="block">{{BioDB_pfam|{{#var:id|}}|{{#var:genome|}}}}
 
<div class="block">{{BioDB_pfam|{{#var:id|}}|{{#var:genome|}}}}
 
<div class="body">
 
<div class="body">
<div class="rowin"><div class="labelin">C1:</div><div class="contentin">{{#var:c1pfam|NA}}</div></div>
+
<div class="rowin"><div class="labelin colorc1">C1:</div><div class="contentin">{{#var:c1pfam|NA}}</div></div>
<div class="rowin"><div class="labelin">A:</div><div class="contentin">{{#var:apfam|NA}}</div></div>
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<div class="rowin"><div class="labelin colora">A:</div><div class="contentin">{{#var:apfam|NA}}</div></div>
<div class="rowin"><div class="labelin">C2:</div><div class="contentin">{{#var:c2pfam|NA}}</div></div>
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<div class="rowin"><div class="labelin colorc2">C2:</div><div class="contentin">{{#var:c2pfam|NA}}</div></div>
 
</div>
 
</div>
 
</div>
 
</div>
 
</div></div>
 
</div></div>
<div class="rowin">
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<div class="rowin">{{#vardefine:isoid|{{#replace:{{#var:id}}|/|_}}}}
 
       {{BioDB protein isoforms|{{#var:id}}|{{#var:genome}}|Incl_main}}
 
       {{BioDB protein isoforms|{{#var:id}}|{{#var:genome}}|Incl_main}}
     <div class="labelin">Main Inclusion Isoform:</div><div class="contentin">{{#var:isoformid}}</div>
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     <div class="labelin">Main Inclusion Isoform:</div><div class="contentin isoforms">{{#var:isoformid}}</div>
 
</div>
 
</div>
 
<div class="rowin">
 
<div class="rowin">
     <div class="contentin">{{ExternalImgURL|{{SERVER}}/domain_plots/{{#var:genome}}/{{#var:sub}}/{{#var:id}}-INC.png|Test}}</div>                   
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     <div class="contentin domainimg">{{#ifeq:{{#vastDBFileExists:domain_plots/{{#var:genome}}/{{#var:sub}}/{{#var:isoid}}-INC.png}}|1|{{ExternalImgURL|{{SERVER}}/domain_plots/{{#var:genome}}/{{#var:sub}}/{{#var:isoid}}-INC.png|{{#var:isoid}}-INC}}}}</div>                   
 
</div>
 
</div>
 
<div class="rowin">
 
<div class="rowin">
 
   {{BioDB protein isoforms|{{#var:id}}|{{#var:genome}}|Excl_main}}
 
   {{BioDB protein isoforms|{{#var:id}}|{{#var:genome}}|Excl_main}}
     <div class="contentin">Main Skipping Isoform:</div><div class="contentin">{{#var:isoformid}}</div>
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     <div class="labelin">Main Skipping Isoform:</div><div class="contentin isoforms">{{#var:isoformid}}</div>
 
</div>
 
</div>
 
<div class="rowin">
 
<div class="rowin">
     <div class="contentin">{{ExternalImgURL|{{SERVER}}/domain_plots/{{#var:genome}}/{{#var:sub}}/{{#var:id}}-EXC.png|Test}}</div>       
+
     <div class="contentin domainimg">{{#ifeq:{{#vastDBFileExists:domain_plots/{{#var:genome}}/{{#var:sub}}/{{#var:isoid}}-EXC.png}}|1|{{ExternalImgURL|{{SERVER}}/domain_plots/{{#var:genome}}/{{#var:sub}}/{{#var:isoid}}-EXC.png|{{#var:isoid}}-EXC}}}}</div>       
 
</div>
 
</div>
 
<div class="rowin">
 
<div class="rowin">
 
         {{BioDB protein isoforms|{{#var:id}}|{{#var:genome}}|Incl_other}}
 
         {{BioDB protein isoforms|{{#var:id}}|{{#var:genome}}|Incl_other}}
     <div class="labelin">Other Inclusion Isoforms:</div><div class="contentin">{{#var:isoformid}}</div>           
+
     <div class="labelin">Other Inclusion Isoforms:</div><div class="contentin isoforms">{{#var:isoformid}}</div>           
 
</div>
 
</div>
 
<div class="rowin">
 
<div class="rowin">
 
     {{BioDB protein isoforms|{{#var:id}}|{{#var:genome}}|Excl_other}}
 
     {{BioDB protein isoforms|{{#var:id}}|{{#var:genome}}|Excl_other}}
     <div class="labelin">Other Skipping Isoforms:</div><div class="contentin">{{#var:isoformid}}</div>   
+
     <div class="labelin">Other Skipping Isoforms:</div><div class="contentin isoforms">{{#var:isoformid}}</div>   
 
</div></div></div></div></div>
 
</div></div></div></div></div>
 
<div class="row"><div class="label small-6 large-4 columns">Associated events</div><div class="content small-6 large-8 columns">{{Associated2|{{#var:id|}}|{{#var:genome|}}}}{{HelpLinkedPage2|type=helpicon|msg=event-associated|output=data-tooltip}}</div>
 
<div class="row"><div class="label small-6 large-4 columns">Associated events</div><div class="content small-6 large-8 columns">{{Associated2|{{#var:id|}}|{{#var:genome|}}}}{{HelpLinkedPage2|type=helpicon|msg=event-associated|output=data-tooltip}}</div>
</div>{{Event Other Assemblies|{{#var:id|}}|{{#var:genome|}}}}
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</div>{{Event Other Assemblies|{{#var:id|}}|{{#var:genome|}}}}{{BioDB primer|{{#var:id|}}|{{#var:genome|}}}}
<div class="row"><div class="label small-6 large-4">Conservation</div><div class="content small-6 large-8 columns">{{HelpLinkedPage2|type=helpicon|msg=event-conservation|output=data-tooltip}}{{ConservationFull2|{{#var:id|}}|{{#var:genome|}}}}</div>
 
</div>{{BioDB primer|{{#var:id|}}|{{#var:genome|}}}}
 
 
<div class="row"><div class="label small-6 large-4 columns">Primers PCR</div>
 
<div class="row"><div class="label small-6 large-4 columns">Primers PCR</div>
 
<div class="content small-6 large-8 columns">
 
<div class="content small-6 large-8 columns">

Latest revision as of 16:24, 6 July 2020